News

Poster au 7e Symposium du GdR MaDICS (Toulouse)

Présentation du Poster “Bioinformatics Workflows - Representation and Query” par Mouna El Garb.

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May 27, 2025 Symposium

Journal Club (JC#7)

Talk by Mouna El Garb about paper “SPARQL Rewritingù - Towards Desired Results” (Xun Jian et al.)

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May 7, 2025 Journal_Club

Journal Club (JC#6)

Talk by Ulysse Le Clanche about papers LLM-based SPARQL Query Generation from Natural Language over Federated Knowledge Graphs ( Emonet V. et al.) and Text2KGBench - A benchmark for ontology-driven knowledge graph generation from text

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Mar 12, 2025 Journal_Club

Annual full meeting

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Last updated on Nov 28, 2024 meeting

Journal Club (JC#5)

Talk by Marie Schmit about paper “Recording provenance of workflow runs with RO-Crate” (Simone Leo et al.)

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Nov 20, 2024 Journal_Club

Journal Club (JC#4)

Talk by Noémie Bossut about paper “Supporting Better Insights of Data Science Pipelines with Fine-grained Provenance” (Chapman A. et al.)

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Sep 11, 2024 Journal_Club

Paper accepted at eScience 2024

Paper on ‘Reproducibility in Named Entity Recognition: A Case Study Analysis’ got accepted at eScience 2024

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Aug 27, 2024 Publications

Paper accepted at NAR Genomics and Bioinformatics

Paper ‘BioFlow-Insight: facilitating reuse of Nextflow workflows with structure reconstruction and visualization’ got accepted at NAR Genomics and Bioinformatics

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Aug 27, 2024 Publications

Poster at JEP TALN RECITAL 2024 (Toulouse)

Poster “Extraction d’entités nommées décrivant des chaînes de traitement bioinformatiques dans des articles scientiﬁques en anglais” by Clémence Sebe

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Jul 12, 2024 Conférence

Journal Club (JC#3)

Talk by Melvin Atay about paper ‘Variability in the analysis of a single neuroimaging dataset by many teams’ (Botvinik-Nezer R et al.)

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Jul 4, 2024 Journal_Club